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Flowers, J. M., Hazzouri, K. M., Lemansour, A., Capote, T., Gros-Balthazard, M., Ferrand, S., Lebrun, M., Amiri, K., & Purugganan, M. D. (2022). Patterns of Volatile Diversity Yield Insights Into the Genetics and Biochemistry of the Date Palm Fruit Volatilome. Frontiers in plant science, 13, 853651. https://doi.org/10.3389/fpls.2022.853651
- Volatile diversity data
https://datadryad.org/stash/dataset/doi:10.5061/dryad.mw6m905z8
Gros-Balthazard M, Flowers JM, Hazzouri KM, et al. 2021. The genomes of ancient date palms germinated from 2,000 y old seeds. Proceedings of the National Academy of Sciencences. 118 (19):e2025337118. https://doi.org/10.1073/pnas.2025337118
- Illumina short read data
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA681290
Hazzouri KM, Gros-Balthazard M, Flowers JM et al. 2019. Genomewide association mapping of date palm fruit traits. Nature Communications. 10:4680. https://doi.org/10.1038/s41467-019-12604-9
- PacBio data for BC4 male
https://www.ncbi.nlm.nih.gov/bioproject/322046 - Illumina short read data for GWAS Panel
https://www.ncbi.nlm.nih.gov/sra/PRJNA505141 - RNA-seq data
https://www.ncbi.nlm.nih.gov/Traces/study1/?acc=PRJNA505138 - SNP data for GWAS
https://datadryad.org/stash/dataset/doi:10.5061/dryad.3mc4265
Downloadable Files (Hazzouri et al. 2019)
- BC4 male assembly (Version 1, r180126) (Download: 749MB):
Pdac_Barhee_chr_unan_cp_180126.fasta - BCR male GFF (Version 1, r180126, HC) (Download: 68MB):
Pdac_Barhee_chr_unan_180126_maker_HC.gff3 - BC4 male transcripts (Version 1, r180126, HC) (Download: 85MB):
Pdac_Barhee_chr_unan_180126.all_.maker_.transcripts_HC.fasta - BC4 male proteins (Version 1, r180126, HC) (Download: 24MB):
Pdac_Barhee_chr_unan_180126.all_.maker_.proteins_HC.fasta
Flowers JM. et al. 2019. Cross-species hybridization and the origin of North African date palms. Proceedings of the National Academy of Sciences USA. 116(5):1651-1658. https://doi.org/10.1073/pnas.1817453116
- Ilumina short read data
https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA495685 - SNP data
https://datadryad.org/stash/dataset/doi:10.5061/dryad.tm40gd8
Hazzouri, KM, Flowers JM, et al. 2015. Whole genome re-sequencing of date palms yields insights into diversification of a fruit tree crop. Nat. Commun. 6:8824. https://doi.org/10.1038/ncomms9824
- Illumina short read data
https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA296800